The Argentina ace netted 46 times in La Liga as the Catalan giants reclaimed their title back from Real Madrid and he was presented with the trophy in Barcelona on Wednesday.
Messi, 26, also won the award following the 2009/10 season, when he scored 34 goals, and again after the 2011/12 campaign when he found the back of the net 50 times.
He scored 31 times in the 2010/11 season but that was not enough to win the Golden Shoe with Cristiano Ronaldo taking the honours after notching 40 times for Madrid.
Messi, who is currently sidelined for eight weeks with a hamstring injury, is the only player to win the trophy three times.
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- Real Madrid
- La Liga
- Cristiano Ronaldo